gatk3的最后一个经典版本3.8

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Valentin Ruano-Rubio c167fb5fdf Fixing GenotypesGVCF. Bug uncovered by some untrimmed alleles in the single sample pipeline output. Notice however does not fix the untrimmed alleles in general. Story: https://www.pivotaltracker.com/story/show/65481104 Changes: 1. Fixed the bug itself. 2. Fixed non-working tests (sliently skipped due to exception in dataProvider).		2014-02-19 14:20:39 -05:00
licensing	deleted old license files	2013-07-02 16:36:47 -04:00
protected	Fixing GenotypesGVCF.	2014-02-19 14:20:39 -05:00
public	Fixing GenotypesGVCF.	2014-02-19 14:20:39 -05:00
settings	Switched commited dependency repository from ivy to maven.	2014-02-03 13:50:46 -05:00
.gitignore	Adding the external example to the build.	2014-02-15 01:26:07 +08:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
ant-bridge.sh	Add ability to run *KnowledgeBaseTests to maven	2014-02-11 14:08:24 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
pom.xml	Merge pull request #518 from broadinstitute/ks_skashin_gatkdocs_arguments	2014-02-14 13:57:19 -05:00

The Genome Analysis Toolkit