gatk-3.8/java
hanna 526ae92093 Getting back to '-L unmapped':
- basic unit tests for interval sorting and merging with mix of mapped/unmapped.
- validation to ensure that locus walkers (really all non-read walkers) blow up with a user error when -L unmapped is specified.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4837 348d0f76-0448-11de-a6fe-93d51630548a
2010-12-14 18:24:18 +00:00
..
config Provide a default logger, some config settings, and some doc updates. 2009-04-29 02:06:05 +00:00
src Getting back to '-L unmapped': 2010-12-14 18:24:18 +00:00
test Getting back to '-L unmapped': 2010-12-14 18:24:18 +00:00