gatk3的最后一个经典版本3.8

Go to file

Phillip Dexheimer c15e6fcc0e Refactored the static lookup arrays in MathUtils (log10Cache, log10FactorialCache, jacobianLogTable) -They are now only computed when necessary -Log10Cache is dynamically resizable, either by calling get() on an out-of-range value or by calling ensureCacheContains -Log10FactorialCache and JacobianLogTable are initialized to a fixed size on first access and are not resizable -Addresses PT 69124396		2014-05-27 22:27:57 -04:00
licensing	deleted old license files	2013-07-02 16:36:47 -04:00
protected	Refactored the static lookup arrays in MathUtils (log10Cache, log10FactorialCache, jacobianLogTable)	2014-05-27 22:27:57 -04:00
public	Refactored the static lookup arrays in MathUtils (log10Cache, log10FactorialCache, jacobianLogTable)	2014-05-27 22:27:57 -04:00
settings/helpTemplates	Replaced local drmaa and Jama artifacts with versions from maven central.	2014-02-22 01:21:35 +08:00
.gitignore	Fixed bug using GraphBased due to infinite likelihoods resulting from the calculation of alignment cost of very long insertion or deletions (done in linear scale)	2014-04-01 16:14:52 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
ant-bridge.sh	Refactored maven directories and java packages replacing "sting" with "gatk".	2014-05-19 17:36:39 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
pom.xml	Fixed GATK docs artifact, moved protected ExampleUG tests.	2014-05-22 21:03:55 -04:00

README.md

The Genome Analysis Toolkit

See http://www.broadinstitute.org/gatk/