gatk-3.8/public/java/src/org/broadinstitute/sting
Guillermo del Angel 51a9ce28e1 Merge remote-tracking branch 'unstable/master' into develop 2012-10-31 10:29:48 -04:00
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alignment Part II of GSA-462: Consistent RODBinding access across Ref and Read trackers 2012-08-30 10:15:10 -04:00
commandline Bugfix for GSA-552 2012-10-26 16:34:16 -04:00
gatk Merge remote-tracking branch 'unstable/master' into develop 2012-10-31 10:29:48 -04:00
jna Device files like /dev/null are now tracked as special by Queue and are not used to generate .out file paths, scattered into a temporary directory, gathered, deleted, etc. 2012-01-23 16:17:04 -05:00
queue Queue now understands -nct and requests the appropriate number of cores from LSF, SGE, etc 2012-10-25 17:26:58 -04:00
utils Bug fix: don't add no-call alleles to the list of ALT alleles being validated. 2012-10-30 14:54:29 -04:00