gatk3的最后一个经典版本3.8

Mauricio Carneiro c045542442 ReduceReads default downsampling strategy is now NORMAL ... Adaptive downsampler had an undesirable behavior in strange regions of the genome. This is a temporary fix, both downsamplers will be made obsolete when engine's positional downsampler gets generalized to read walkers.		2012-03-14 17:29:47 -04:00
public	UnitTests for ActivityProfile and minor ART cleanup	2012-03-14 17:26:37 -04:00
settings	Rev. tribble to fix BED codec bug in tribble 51	2012-01-17 16:40:26 -05:00
.gitignore	Minor additions to the shared .gitignore file, now that Mark has checked one in.	2011-10-26 12:24:28 -04:00
LICENSE	One last test...	2011-06-28 19:18:17 -04:00
build.xml	Public-key authorization scheme to restrict use of NO_ET	2012-03-06 00:09:43 -05:00
ivy.xml	S3 upload now directly creates the XML report in memory and puts that in S3	2012-01-29 15:14:58 -05:00