gatk3的最后一个经典版本3.8

Ryan Poplin c025e84c8b Fix for calculating read pos rank sum test with reads that are informative but don't actually overlap the variant due to some hard clipping. ... -- Updated a few integration tests for HC, UG, and UG general ploidy		2013-02-19 14:09:24 -05:00
licensing	Removing the symlink from the private license file	2013-02-09 12:57:44 -05:00
protected/java	Fix for calculating read pos rank sum test with reads that are informative but don't actually overlap the variant due to some hard clipping.	2013-02-19 14:09:24 -05:00
public	Fix for calculating read pos rank sum test with reads that are informative but don't actually overlap the variant due to some hard clipping.	2013-02-19 14:09:24 -05:00
settings	Refactored GATKDocs categories some more ( GSATDG-62 )	2013-02-13 16:49:18 -05:00
.gitignore	Fixing the licensing scripts	2013-01-26 13:42:49 -05:00
build.xml	Minor build.xml cleanup post-variant-migration	2013-02-06 11:16:52 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Replace org.broadinstitute.variant with jar built from the Picard repo	2013-02-05 17:24:25 -05:00