gatk3的最后一个经典版本3.8

David Roazen c0084c741b Pilot BCF2 Implementation: Checkpointing the code ... * Not working yet, still very much a work-in-progress with lots of placeholders * Needed to check this in to enable possible collaboration, since it's going slower than anticipated and the conference deadline looms.		2012-05-01 12:23:10 -04:00
licensing	Remove old licensing	2012-04-25 12:23:08 -04:00
public	Pilot BCF2 Implementation: Checkpointing the code	2012-05-01 12:23:10 -04:00
settings	Rev. tribble to fix BED codec bug in tribble 51	2012-01-17 16:40:26 -05:00
.gitignore	Minor additions to the shared .gitignore file, now that Mark has checked one in.	2011-10-26 12:24:28 -04:00
build.xml	Added function to get bases from the current base forward in the window in ReferenceContext	2012-04-06 16:07:46 -04:00
ivy.xml	S3 upload now directly creates the XML report in memory and puts that in S3	2012-01-29 15:14:58 -05:00