gatk-3.8/protected/java
Eric Banks c0030f3f2d We no longer subset down to the best N haplotypes for the GL calculation.
I explain in comments within the code that this was causing problems with the marginalization over events.
2013-06-11 11:51:26 -04:00
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src/org/broadinstitute/sting We no longer subset down to the best N haplotypes for the GL calculation. 2013-06-11 11:51:26 -04:00
test/org/broadinstitute/sting Do not allow the use of Ns in reads for graph construction. 2013-06-11 11:51:26 -04:00