chartl bfc6ef1753 A successful attempt at a queue integration test, ensuring that the InProcessFunction libraries are working as expected. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5190 348d0f76-0448-11de-a6fe-93d51630548a		2011-02-03 21:30:35 +00:00
..
qscript	made ApplyVariantCut a default part of the pipeline, added the -noCut option if you don't want to use it.	2011-02-03 19:29:36 +00:00
src/org/broadinstitute/sting	Bug fixes in the in process function (spoiled by python: was not closing my writers). SortByRef now works somewhat like the perl script does, rather than doing a memory-expensive sort. Adding a QTools qscript which is kinda clunky, and will be used mostly for integration tests of these IPFs, pending some better way to construct argument collections and function accessors at compile-time.	2011-02-03 17:32:46 +00:00
test/org/broadinstitute/sting/queue	A successful attempt at a queue integration test, ensuring that the InProcessFunction libraries are working as expected.	2011-02-03 21:30:35 +00:00