Eric Banks 277ba94c7b Update from dbsnp135 to dbsnp137.		2012-08-31 14:06:29 -04:00
..
examples	Added setupRetry() to modify jobs when Queue is run with '-retry' and jobs are about to restart after an error.	2012-08-13 15:43:05 -04:00
lib	Mostly small changes to my own scala scripts: .vcf.gz compatibility for output files, smarter beagle generation, simple script to scatter-gather combine variants. Whole genome indel calling now uses the gold standard indel set.	2012-02-22 17:20:04 -05:00
DataProcessingPipeline.scala	Disabling indel quals in BaseRecalibrator as it should be, not PrintReads.	2012-08-01 09:23:04 -04:00
GATKResourcesBundle.scala	Update from dbsnp135 to dbsnp137.	2012-08-31 14:06:29 -04:00
MethodsDevelopmentCallingPipeline.scala	Turning off PHONE HOME option in the MDCP	2012-01-27 11:13:30 -05:00
PacbioProcessingPipeline.scala	Disabling indel quals in BaseRecalibrator as it should be, not PrintReads.	2012-08-01 09:23:04 -04:00