Geraldine Van der Auwera bf875974d1 Prep MuTect2 and ContEst for release ... Renamed M2 to MuTect2 Renamed ContaminationWalker to ContEst Refactored related tests and usages (including in Queue scripts) Moved M2 and ContEst + accompanying classes from private to protected Made QSS a StandardSomaticAnnotation (new annotation group/interface) to prevent it from being sucked in with the rest of the StandardAnnotation group		2015-11-24 16:43:20 -05:00
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src	Prep MuTect2 and ContEst for release	2015-11-24 16:43:20 -05:00
pom.xml	Move GatherBqsrReports from private to protected	2015-11-10 17:40:58 -05:00