ebanks bf40351094 Minor update ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5778 348d0f76-0448-11de-a6fe-93d51630548a		2011-05-08 03:48:37 +00:00
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src	Minor update	2011-05-08 03:48:37 +00:00
test	Fix for IndelRealigner memory problem. Now the Constrained mate fixing writer is told whether a read has been modified and, if it wasn't, can dump it when the cache needs to get flushed at places with tons of coverage.	2011-05-06 19:34:41 +00:00