andrewk bef475778f - Updated --hapmap switch to --hapmap-chip to reflect the data being chip data for an individual rather than population allele frequency data in Hapmap ... - Corrected some bugs to get metrics logging working - Added a switch --force_1base_probs to ignore 4-base probalities if they exist git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@287 348d0f76-0448-11de-a6fe-93d51630548a		2009-04-03 17:32:31 +00:00
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src/org/broadinstitute/sting	- Updated --hapmap switch to --hapmap-chip to reflect the data being chip data for an individual rather than population allele frequency data in Hapmap	2009-04-03 17:32:31 +00:00
test/org/broadinstitute/sting/utils/cmdLine	Fix argument parser test case.	2009-03-27 16:05:18 +00:00