gatk3的最后一个经典版本3.8

MauricioCarneiro bd9875aff5 Merge pull request #61 from broadinstitute/dr_update_release_scripts ... 1. removed all directives related to gatklite (we're getting rid of this distribution) 2. adapting scripts to the new gsa-protected repository		2013-02-25 10:37:59 -08:00
licensing	Removing the symlink from the private license file	2013-02-09 12:57:44 -05:00
protected/java	Replace Smith-Waterman alignment with the bubble traversal.	2013-02-22 15:42:16 -05:00
public	Replace Smith-Waterman alignment with the bubble traversal.	2013-02-22 15:42:16 -05:00
settings	Haplotype/Allele based optimizations for the HaplotypeCaller that knock off nearly 20% of the total runtime (multi-sample).	2013-02-21 10:14:11 -05:00
.gitignore	Fixing the licensing scripts	2013-01-26 13:42:49 -05:00
build.xml	Updating TestNG to the latest version	2013-02-22 09:40:23 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Updating TestNG to the latest version	2013-02-22 09:40:23 -05:00