1. Initial code for annotating calls with the base mismatch rate within a reference window (still needs analysis). 2. Move error checking code from rodVCF to VCFRecord. 3. More improvements to SNP Genotype callset concordance. 4. Fixed some comments in Variation/Genotype git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2341 348d0f76-0448-11de-a6fe-93d51630548a |
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| src/org/broadinstitute/sting | ||
| test/org/broadinstitute/sting | ||