gatk3的最后一个经典版本3.8

Guillermo del Angel bd26de9741 Resurrect IndelCountCovariates walker, update to new rod system. IndelCountCovariate (singular) seems broken, not to be used for now (but it's not very useful anyway)		2011-08-23 10:50:55 -04:00
public	Further Bug fixes to CountVariants: stratifications were wrong in case genotypes had no-calls, for example if we stratified by sample and a sample had a no-call, this no-call was considered a true variant and counts were incorrectly increased	2011-08-22 20:42:47 -04:00
settings	Build.xml -- contracts not built by default. Slightly simpler CSS for dl.	2011-08-19 15:07:26 -04:00
LICENSE	One last test...	2011-06-28 19:18:17 -04:00
build.xml	Build.xml -- contracts not built by default. Slightly simpler CSS for dl.	2011-08-19 15:07:26 -04:00
ivy.xml	The tribble dependency is now handled through ivy. Revved tribble to r18 and removed obsolete build targets in build.xml	2011-08-11 16:38:29 -04:00