bcf80cc7b3
-- Moved a variety of useful formatting routines for ratios, percentages, etc, into VariantEvalator.java so everyone can share. Code updated to use these routines where appropriate -- Added variantWasSingleton() to VariantEvaluator, which can be used to determine if a site, even after subsetting to specific samples, was a singleton in the original full VCF -- TableType, which used to be an interface, is now an abstract class, allowing us to implement some generally functionality and avoid duplication. -- This included creating a getRowName() function that used to be hardcoded as "row" but how can be overridden. -- #### This allows us implement molten tables, which are vastly easier to use than multi-row data sets. See IndelHistogram class (in later commit) for example of molten VE output |
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