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Phillip Dexheimer 1482a53aba Added -writeFullFormat engine-level argument 
* This argument forces GATK to always write every record in the VCF format field, even if some records at the end are missing and could be removed
  * Revved htsjdk and picard
  * PT 70993484
 		2014-09-17 08:25:27 -04:00
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1.120.1620 Added -writeFullFormat engine-level argument 2014-09-17 08:25:27 -04:00