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David Roazen 02018ca764 Legacy BaseRecalibrator walker is neither TreeReducible nor NanoSchedulable 
The old BaseRecalibrator walker is and never will be thread-safe, since it's a
LocusWalker that uses read attributes to track state.

ONLY the newer DelocalizedBaseRecalibrator is believed likely to be thread-safe
at this point. It is safe to run the DelocalizedBaseRecalibrator with -nct > 1
for testing purposes, but wait for further testing to be done before using it
for production purposes in multithreaded mode.
 		2012-10-24 15:22:50 -04:00
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src/org/broadinstitute/sting BQSR: use more granular locking for concurrency control 2012-10-24 15:22:50 -04:00
test/org/broadinstitute/sting Legacy BaseRecalibrator walker is neither TreeReducible nor NanoSchedulable 2012-10-24 15:22:50 -04:00