kshakir edaa278edd Removed cases where various toolkit functions were accessing GenomeAnalysisEngine.instance. ... This will allow other programs like Queue to reuse the functionality. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4351 348d0f76-0448-11de-a6fe-93d51630548a		2010-09-25 02:49:30 +00:00
..
net/sf/picard/reference	IndexedFastaSequenceFile is now in Picard; transitioning to that implementation.	2010-07-01 04:40:31 +00:00
org/broadinstitute/sting	Removed cases where various toolkit functions were accessing GenomeAnalysisEngine.instance.	2010-09-25 02:49:30 +00:00