Eric Banks 67932b357d Bug fix for RR: don't let the softclip start position be less than 1		2012-12-03 15:59:14 -05:00
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src	Bug fix for RR: don't let the softclip start position be less than 1	2012-12-03 15:59:14 -05:00
test	Quick fix: base qual array in the GATKSAMRecord stores the actual phred values (-33) and not the original bytes (duh).	2012-12-03 12:18:20 -05:00