gatk3的最后一个经典版本3.8

Eric Banks bca860723a Updating tests to handle bad validation data files (that used the wrong qual score encoding); overrides push from stable.		2012-12-03 22:01:07 -05:00
licensing	Final final final version of the license.	2012-07-20 18:00:02 -04:00
protected/java	Updating tests to handle bad validation data files (that used the wrong qual score encoding); overrides push from stable.	2012-12-03 22:01:07 -05:00
public	Bug fix for RR: don't let the softclip start position be less than 1	2012-12-03 15:59:14 -05:00
settings	Final r119 tribble jar	2012-11-02 14:30:33 -04:00
.gitignore	adding some directories to gitignore	2012-09-27 11:09:41 -04:00
build.xml	Refactored entire NA12878KB to allow us to easily build a na12878kb.jar for IGV integration	2012-11-29 14:38:09 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Use build jars in test classpaths by default	2012-11-28 22:57:04 -05:00