droazen 664960373d Merge pull request #31 from broadinstitute/yf_fast_BAM_index_traversal ... -re-enables fast BAM indexing		2013-02-15 09:12:32 -08:00
..
alignment	Refactored GATKDocs categories some more ( GSATDG-62 )	2013-02-13 16:49:18 -05:00
commandline	Move some VCF/VariantContext methods back to the GATK based on feedback	2013-01-29 16:56:55 -05:00
gatk	Merge pull request #31 from broadinstitute/yf_fast_BAM_index_traversal	2013-02-15 09:12:32 -08:00
jna	Updated all JAVA file licenses accordingly	2013-01-10 17:06:41 -05:00
queue	change the default VCFs gatherer of the GATK (not just the UG)	2013-01-18 15:03:12 -05:00
tools	Move some VCF/VariantContext methods back to the GATK based on feedback	2013-01-29 16:56:55 -05:00
utils	Merge pull request #39 from broadinstitute/tj_printreads_tag_for_bqsr_GSA-720	2013-02-15 07:18:28 -08:00