depristo bae0b6cba8 A script for playing with BEAGLE refinement parameters. Supports construction of reference panels from NGS data sets with varying niteration and calibration curve parameters, as well as imputing missing genotypes in a VCF with this reference panel, and comparison to a deeply sequenced individual. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5523 348d0f76-0448-11de-a6fe-93d51630548a		2011-03-27 12:44:25 +00:00
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qscript	A script for playing with BEAGLE refinement parameters. Supports construction of reference panels from NGS data sets with varying niteration and calibration curve parameters, as well as imputing missing genotypes in a VCF with this reference panel, and comparison to a deeply sequenced individual.	2011-03-27 12:44:25 +00:00
src/org/broadinstitute/sting	When host name lookup fails just use the whole internet address instead of truncating to the last two octets of the IP address.	2011-03-25 18:18:22 +00:00
test/org/broadinstitute/sting/queue	Enabled the parameterize option for debugging PipelineTest MD5s.	2011-03-26 00:41:47 +00:00