Yossi Farjoun baad965a57 - Changed loadContaminationFile file parser to delimit by tab only. This allows spaces in sampleIDs, which apparently are allowed. ... - This was needed since samples with spaces in their names are regularly found in the picard pipeline. - Modified the tests to account for this (removed spaces from the good tests, and changed the failing tests accordingly) - Cleaned up the unit tests using a @DataProvider (I'm in love...). - Moved AlleleBiasedDownsamplingUtilsUnitTest to public to match location of class it is testing (due to the way bamboo operates)		2013-03-07 13:04:24 -05:00
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src/org/broadinstitute/sting	Added the functionality to impose a relative ordering on ReadTransformers in the GATK engine.	2013-03-06 12:38:59 -05:00
test/org/broadinstitute/sting	- Changed loadContaminationFile file parser to delimit by tab only. This allows spaces in sampleIDs, which apparently are allowed.	2013-03-07 13:04:24 -05:00