gatk3的最后一个经典版本3.8

Mark DePristo b9a33d3c66 Split original and optimized ART into largely independent pieces ... -- Allows us to cleanly run old and new art, which now have different traversal behavior (on purpose). Split unit tests as well.		2013-01-11 15:17:18 -05:00
licensing	Cleaning CRLF terminations in the licenses	2013-01-10 17:06:29 -05:00
protected/java	Near final cleanup of PileupElement	2013-01-11 15:17:17 -05:00
public	Split original and optimized ART into largely independent pieces	2013-01-11 15:17:18 -05:00
settings	Final r119 tribble jar	2012-11-02 14:30:33 -04:00
.gitignore	adding some directories to gitignore	2012-09-27 11:09:41 -04:00
build.xml	Updating Queue maven version to 0.0.2	2013-01-10 13:46:49 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Updating to latest google caliper code	2013-01-11 15:17:16 -05:00