Mark DePristo b92f563d06 NanoScheduler optimization for TraverseReadsNano ... -- Pre-read MapData into a list, which is actually faster than dealing with future lock contention issues with lots of map threads -- Increase the ReadShard default size to 100K reads by default		2012-12-24 13:35:56 -05:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	NanoScheduler optimization for TraverseReadsNano	2012-12-24 13:35:56 -05:00
test	Added functionality of outputting sorted GATKReport Tables	2012-12-20 14:02:21 -05:00