Mark DePristo 5a5422e4f8 Refactor PerSampleReadStates into a separate class ... -- No longer update the total counts in each per-sample state manager, but instead return delta counts that are updated by the overall ReadStateManager -- One step on the way to improving the underlying representation of the data in PerSampleReadStateManager -- Make LocusIteratorByState final		2013-01-14 16:30:16 -05:00
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net/sf	Updated all JAVA file licenses accordingly	2013-01-10 17:06:41 -05:00
org/broadinstitute	Refactor PerSampleReadStates into a separate class	2013-01-14 16:30:16 -05:00