Mark DePristo b863390cb1 Moving reduced read functionality into GATKSAMRecord ... -- More functions take / produce GATKSAMRecords instead of SAMRecord		2011-10-21 13:28:05 -04:00
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R	Fixing errors in queueJobReport runtime unit	2011-10-07 12:04:53 -07:00
c	Reinitialize random seed in the bwa bindings from the fixed seed stored in the	2011-07-22 13:41:53 -04:00
chainFiles	…
doc	…
java	Moving reduced read functionality into GATKSAMRecord	2011-10-21 13:28:05 -04:00
packages	Enable testing of the jars produced by the packaging system.	2011-10-14 03:08:28 -04:00
perl	Update to the bindings for liftOverVCF.pl (to -V from -B)	2011-09-15 15:33:09 -04:00
scala	no sort order	2011-10-20 18:44:09 -04:00
testdata	Oops, forgot the PED test file	2011-10-05 21:09:08 -07:00