Mauricio Carneiro da21924b44 Make the missing targets output never use stdout ... Problem -------- Diagnose Targets is outputting missing intervals to stdout if the argument -missing is not provided Solution -------- Make it NOT default to stdout [Delivers #50386741]		2013-05-22 14:22:54 -04:00
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java	Make the missing targets output never use stdout	2013-05-22 14:22:54 -04:00
scala/test/org/broadinstitute/sting/queue/pipeline/examples	Fix improper dependencies in QScripts used by pipeline tests, and attempt to fix the flawed MisencodedBaseQualityUnitTest	2013-02-27 04:45:53 -05:00