gatk3的最后一个经典版本3.8

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Mark DePristo b7d1096ced Added onlyEmitSamples argument to UnifiedGenotyper -- When provided, this argument causes us to only emit the selected samples into the VCF. No INFO field annotations (AC for example) or other features are modified. It's current primary use is for efficiently evaluating joint calling. -- Add integration test for onlyEmitSamples		2013-08-09 11:00:15 -04:00
licensing	deleted old license files	2013-07-02 16:36:47 -04:00
protected	Added onlyEmitSamples argument to UnifiedGenotyper	2013-08-09 11:00:15 -04:00
public	Merge pull request #359 from lbergelson/lb_relax_add_parameter	2013-08-07 06:45:01 -07:00
settings	Rev picard to get optimized tribble feature reads	2013-08-02 10:31:36 -04:00
.gitignore	Detect stuck lock-acquisition calls, and disable file locking for tests	2013-04-24 22:49:02 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
build.xml	build.xml: make ant -p output only important build targets	2013-07-19 14:35:00 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Brought all of ReduceReads to fastutils	2013-02-23 22:53:23 -05:00

The Genome Analysis Toolkit