88 lines
3.2 KiB
HTML
88 lines
3.2 KiB
HTML
<!--
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~ Copyright (c) 2012, The Broad Institute
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~
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~ Permission is hereby granted, free of charge, to any person
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~ obtaining a copy of this software and associated documentation
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~ files (the "Software"), to deal in the Software without
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~ restriction, including without limitation the rights to use,
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~ copy, modify, merge, publish, distribute, sublicense, and/or sell
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~ copies of the Software, and to permit persons to whom the
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~ Software is furnished to do so, subject to the following
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~ conditions:
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~
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~ The above copyright notice and this permission notice shall be
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~ included in all copies or substantial portions of the Software.
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~ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
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~ EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
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~ OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
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~ NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
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~ HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
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~ WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
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~ FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
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~ OTHER DEALINGS IN THE SOFTWARE.
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-->
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<#--
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This file contains all the theming neccesary to present GATKDocs on the GATK website
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Included are the paths to our bootstrap assets as well as helper functions to generate relevant links
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-->
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<#global siteRoot = "http://www.broadinstitute.org/gatk/" />
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<#global guideIndex = "http://www.broadinstitute.org/gatk/guide/" />
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<#global forum = "http://gatkforums.broadinstitute.org/" />
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<#macro footerInfo>
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<hr>
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<p><a href='#top'><i class='fa fa-chevron-up'></i> Return to top</a></p>
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<hr>
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<p class="see-also">See also
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<a href="${guideIndex}">Guide Index</a> |
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<a href="index">Tool Documentation Index</a> |
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<a href="${forum}">Support Forum</a>
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</p>
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<p class="version">GATK version ${version} built at ${timestamp}.
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<#-- closing P tag in next macro -->
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</#macro>
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<#macro footerClose>
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<#-- ugly little hack to enable adding tool-specific info inline -->
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</p>
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</#macro>
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<#macro getCategories groups>
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<style>
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#sidenav .accordion-body a {
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color : gray;
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}
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.accordion-body li {
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list-style : none;
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}
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</style>
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<ul class="nav nav-pills nav-stacked" id="sidenav">
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<#assign seq = ["engine", "tools", "utilities", "other"]>
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<#list seq as supercat>
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<hr>
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<#list groups?sort_by("name") as group>
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<#if group.supercat == supercat>
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<li><a data-toggle="collapse" data-parent="#sidenav" href="#${group.id}">${group.name}</a>
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<div id="${group.id}"
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<?php echo ($group == '${group.name}')? 'class="accordion-body collapse in"'.chr(62) : 'class="accordion-body collapse"'.chr(62);?>
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<ul>
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<#list data as datum>
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<#if datum.group == group.name>
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<li>
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<a href="${datum.filename}">${datum.name}</a>
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</li>
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</#if>
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</#list>
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</ul>
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</div>
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</li>
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</#if>
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</#list>
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</#list>
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</ul>
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</#macro> |