gatk3的最后一个经典版本3.8
 
 
 
 
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Phillip Dexheimer b73e9d506a Added GATKVCFConstants and GATKVCFHeaderLines to consolidate the GATK-specific VCF annotations
* Removed unused annotations (CCC and HWP)
 * Renamed one of the two GC annotations to "IGC" (for Interval GC)
 * Revved picard & htsjdk (GATK constants are now removed from htsjdk)
 * PT 82046038
2015-01-13 21:32:09 -05:00
licensing Updated license information 2014-10-14 17:10:12 -04:00
protected Added GATKVCFConstants and GATKVCFHeaderLines to consolidate the GATK-specific VCF annotations 2015-01-13 21:32:09 -05:00
public Added GATKVCFConstants and GATKVCFHeaderLines to consolidate the GATK-specific VCF annotations 2015-01-13 21:32:09 -05:00
settings/helpTemplates Output JSON version of docs for Galaxy 2014-10-09 06:42:25 -04:00
.gitignore Fixed bug using GraphBased due to infinite likelihoods resulting from the calculation of alignment cost of very long insertion or deletions (done in linear scale) 2014-04-01 16:14:52 -04:00
README.md Update README file for the 2.6 release 2013-06-20 13:08:29 -04:00
ant-bridge.sh Added faster built executable, non-packaged jars. 2014-11-05 00:30:46 +08:00
intellij_example.tar.bz2 Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!) 2012-09-27 11:04:56 -04:00
pom.xml Faster builds, with updates to documentation generation. 2014-11-05 00:32:23 +08:00

README.md

The Genome Analysis Toolkit

See http://www.broadinstitute.org/gatk/