gatk-3.8

gatk3的最后一个经典版本3.8

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Mark DePristo b7089a3b05 Improvements to QualQuantizer; Walker to quantize quals in BAM file -- QualQuantizer now tracks merge order and level in the QualInterval for debugging / visualization -- Write out QualIntervals tree for visualization -- visualizeQuantizedQuals.R r script for basic visualization of the quality score quantization		2012-03-06 16:56:58 -05:00
public	Do not fail tests that require the GATK private key if the user does not have permission to read it	2012-03-06 15:57:02 -05:00
settings	Rev. tribble to fix BED codec bug in tribble 51	2012-01-17 16:40:26 -05:00
.gitignore	Minor additions to the shared .gitignore file, now that Mark has checked one in.	2011-10-26 12:24:28 -04:00
LICENSE	One last test...	2011-06-28 19:18:17 -04:00
build.xml	Public-key authorization scheme to restrict use of NO_ET	2012-03-06 00:09:43 -05:00
ivy.xml	S3 upload now directly creates the XML report in memory and puts that in S3	2012-01-29 15:14:58 -05:00