gatk3的最后一个经典版本3.8

David Roazen b6a7c3f780 Merged bug fix from Stable into Unstable ... Resolved merge conflict Conflicts: public/java/test/org/broadinstitute/sting/BaseTest.java		2012-06-05 17:44:44 -04:00
licensing	Remove old licensing	2012-04-25 12:23:08 -04:00
protected/java/src/org/broadinstitute/sting	build system overhaul	2012-05-17 15:16:29 -04:00
public	Merged bug fix from Stable into Unstable	2012-06-05 15:58:23 -04:00
settings	Testing of BCF codec	2012-05-24 10:57:01 -04:00
.gitignore	Minor additions to the shared .gitignore file, now that Mark has checked one in.	2011-10-26 12:24:28 -04:00
build.xml	ant fasttest: for when you just can't wait	2012-06-01 15:17:18 -04:00
ivy.xml	Final updates to integration tests for BCF2	2012-05-24 10:58:59 -04:00