carneiro b66c6dced1 - No longer prints out non confident calls (they were leading to tables that don't add up and confusing some Pacbio folk). ... - Added sensitivity and Specificity to the report. - With the changes in genotype likelihoods, the indel analysis only happens if the BAM file also has an extended event. Not great, but at least it's not broken. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5759 348d0f76-0448-11de-a6fe-93d51630548a		2011-05-04 19:26:55 +00:00
..
config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src	- No longer prints out non confident calls (they were leading to tables that don't add up and confusing some Pacbio folk).	2011-05-04 19:26:55 +00:00
test	Updating VariantGaussianMixtureModelUnitTest to use truth sensitivity cutting	2011-05-04 13:56:01 +00:00