Ami Levy-Moonshine e6ef37de1d Add an option to filter the read bases that are taking into account for the coveraged intervals. For that, new two arguments were added: minBaseQuality and minMappingQuality		2013-11-18 17:29:32 -05:00
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src/org/broadinstitute/sting	Add an option to filter the read bases that are taking into account for the coveraged intervals. For that, new two arguments were added: minBaseQuality and minMappingQuality	2013-11-18 17:29:32 -05:00
test/org/broadinstitute/sting	Improvements to the reference model pipeline.	2013-11-01 17:58:25 -04:00