gatk-3.8/scala
rpoplin b5ab2274f6 Committing the base qscript I used to make the Phase1 Project Consensus. Does per-population cleaning and simplifyBAM, and then per-analysis-panel calling with genotype given alleles. Combines info fields using the panel with max AC.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5764 348d0f76-0448-11de-a6fe-93d51630548a
2011-05-04 20:13:26 +00:00
..
qscript Committing the base qscript I used to make the Phase1 Project Consensus. Does per-population cleaning and simplifyBAM, and then per-analysis-panel calling with genotype given alleles. Combines info fields using the panel with max AC. 2011-05-04 20:13:26 +00:00
src/org/broadinstitute/sting Why won't you die? 2011-05-04 19:13:39 +00:00
test/org/broadinstitute/sting/queue Fixed a bug where empty intervals were being scattered zero ways parallel. Would be awesome to use the GAE at some point. 2011-04-29 22:42:48 +00:00