MauricioCarneiro b58a0eca6b Merge pull request #33 from broadinstitute/gg_more_gatkdocs_tweaks_GSATDG-62 ... Refactored GATKDocs categories some more ( GSATDG-62 )		2013-02-14 22:35:07 -08:00
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src/org/broadinstitute/sting	Refactored GATKDocs categories some more ( GSATDG-62 )	2013-02-13 16:49:18 -05:00
test/org/broadinstitute/sting	Updated md5's from BiasedDownsamplerIntegrationTest that changed due to changes in HaplotypeCaller - changing HashMaps to LinkedHashMaps changed ordering of reads presented to BiasedDownSampler which changed reads chosen, thereby marginally changing PL's and some site info.	2013-02-14 20:18:49 -05:00