gatk3的最后一个经典版本3.8

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Karthik Gururaj b57de8eec1 Merge branch 'master' of /home/karthikg/broad/archive/hmm_intra into intel_pairhmm		2014-01-16 20:29:51 -08:00
PairHMM_JNI	Renamed directory	2014-01-16 20:28:50 -08:00
licensing	deleted old license files	2013-07-02 16:36:47 -04:00
protected	1. Added support for JNI integration for LoglessCaching PairHMM AVX	2014-01-15 11:07:09 -08:00
public	Write a new tool for spliting reads that have N cigar string.	2014-01-01 22:21:36 -05:00
settings	Rev'ing the Variant jar to incorporate some patches to the BCF encoder that Menachem needs.	2014-01-02 23:33:17 -05:00
.gitignore	Renamed directory	2014-01-16 20:28:50 -08:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
build.xml	1. Added support for JNI integration for LoglessCaching PairHMM AVX	2014-01-15 11:07:09 -08:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Changing from scala 2.9.2 to 2.10.2.	2013-09-23 12:42:22 -04:00

The Genome Analysis Toolkit