depristo 6ce3835622 Removing unused methods in QualityUtils; ReferenceContext now converting all bases to upper case, but can be disabled with static boolean ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3399 348d0f76-0448-11de-a6fe-93d51630548a		2010-05-20 12:38:06 +00:00
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broadinstitute/sting	Removing unused methods in QualityUtils; ReferenceContext now converting all bases to upper case, but can be disabled with static boolean	2010-05-20 12:38:06 +00:00