David Roazen 85d31f80a2 Merged bug fix from Stable into Unstable		2012-02-13 16:37:11 -05:00
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GATKBAMFileSpan.java	Fix serious engine bug that could cause reads to be dropped under certain circumstances	2012-02-13 16:25:21 -05:00
GATKBin.java	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
GATKChunk.java	Merged bug fix from Stable into Unstable	2012-02-13 16:37:11 -05:00
PicardNamespaceUtils.java	Retiring Picard customizations for async I/O and cleaning up parts of the code to use common Picard utilities I recently discovered.	2012-02-08 08:34:37 -05:00