gatk3的最后一个经典版本3.8

Tad Jordan b491c177ff Added functionality of outputting sorted GATKReport Tables ... - Added an optional argument to BaseRecalibrator to produce sorted GATKReport Tables - Modified BSQR Integration Tests to include the optional argument. Tests now produce sorted tables		2012-12-20 14:02:21 -05:00
licensing	Final final final version of the license.	2012-07-20 18:00:02 -04:00
protected/java	Added functionality of outputting sorted GATKReport Tables	2012-12-20 14:02:21 -05:00
public	Added functionality of outputting sorted GATKReport Tables	2012-12-20 14:02:21 -05:00
settings	Final r119 tribble jar	2012-11-02 14:30:33 -04:00
.gitignore	adding some directories to gitignore	2012-09-27 11:09:41 -04:00
build.xml	Move VCF/BCF2/VariantContext to new standalone org.broadinstitute.variant package	2012-12-19 10:25:22 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Use build jars in test classpaths by default	2012-11-28 22:57:04 -05:00