Mark DePristo bbdf9ee91b BQSR cleanup: merge Advanced and Standard recalibration engine into just the RecalibrationEngine ... -- As we are no longer maintaining a public/protected system we need only have one RecalibrationEngine. -- Misc. code cleanup and docs along the way		2013-01-04 11:39:24 -05:00
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gatk	BQSR cleanup: merge Advanced and Standard recalibration engine into just the RecalibrationEngine	2013-01-04 11:39:24 -05:00
utils	Move VCF/BCF2/VariantContext to new standalone org.broadinstitute.variant package	2012-12-19 10:25:22 -05:00
package-info.java	build system overhaul	2012-05-17 15:16:29 -04:00