Ryan Poplin b3cc04976f Fixing BQSR bug reported on the forum for reads that being with insertions.		2012-10-08 10:18:29 -04:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Fixing BQSR bug reported on the forum for reads that being with insertions.	2012-10-08 10:18:29 -04:00
test	hmk123's error on the forum came from the reference context occasionally lacking bases needed for validating the reference bases in the variant context. (no @Window for VariantsToBinaryPed). This bugfix adresses this and other minor items:	2012-09-29 00:55:31 -04:00