gatk3的最后一个经典版本3.8

Mark DePristo b393c27f07 QualityUtils now uses runtime argument checks instead of contract ... -- There's some runtime cost for these tests, but it's not big enough to outweigh the value of catching errors quickly		2013-02-16 07:31:38 -08:00
licensing	Removing the symlink from the private license file	2013-02-09 12:57:44 -05:00
protected/java	Bugfix for FisherStrand	2013-02-16 07:31:38 -08:00
public	QualityUtils now uses runtime argument checks instead of contract	2013-02-16 07:31:38 -08:00
settings	Refactored GATKDocs categories some more ( GSATDG-62 )	2013-02-13 16:49:18 -05:00
.gitignore	Fixing the licensing scripts	2013-01-26 13:42:49 -05:00
build.xml	Minor build.xml cleanup post-variant-migration	2013-02-06 11:16:52 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Replace org.broadinstitute.variant with jar built from the Picard repo	2013-02-05 17:24:25 -05:00