gatk3的最后一个经典版本3.8

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Louis Bergelson b32ad99d3f Changing from scala 2.9.2 to 2.10.2. --modified ivy dependencies --modified scala classpath in build.xml to include scala-reflect --changed imports to point to the new scala scala.reflect.internal.util --set the bootclasspath in QScriptManager as well as the classpath variable. --removing Set[File] <-> Set[String] conversions ----Set is invariant now and the conversions broke --removing unit tests for Set[File] <-> Set[String] conversions		2013-09-23 12:42:22 -04:00
licensing	deleted old license files	2013-07-02 16:36:47 -04:00
protected	Changing max coverage threshold	2013-09-20 18:54:40 -04:00
public	Changing from scala 2.9.2 to 2.10.2.	2013-09-23 12:42:22 -04:00
settings	- update picard, sam, variants and tribble after fixing bug in BCF2Utils.makeDictionary as reported in ticket 52571227	2013-08-21 12:06:42 -04:00
.gitignore	Detect stuck lock-acquisition calls, and disable file locking for tests	2013-04-24 22:49:02 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
build.xml	Changing from scala 2.9.2 to 2.10.2.	2013-09-23 12:42:22 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Changing from scala 2.9.2 to 2.10.2.	2013-09-23 12:42:22 -04:00

The Genome Analysis Toolkit