alecw b2b4ff7eca Cache SAMReadGroup rather than get it twice ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2087 348d0f76-0448-11de-a6fe-93d51630548a		2009-11-19 17:27:18 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src/org/broadinstitute/sting	Cache SAMReadGroup rather than get it twice	2009-11-19 17:27:18 +00:00
test/org/broadinstitute/sting	Test to ensure that ConcordanceTruthTable and those walkers which rely on it for tabulating pooled truth information from truth information of the individuals within the pool is doing that calculation correctly. Tests single het, single hom (with/without reference), together, together without reference, and a mix of everything.	2009-11-19 15:26:32 +00:00