ebanks b282635b05 Complete reworking of Fisher's exact test for strand bias: ... - fixed math bug (pValue needs to be initialized to pCutoff, not 0) - perform factorial calculations in log space so that huge numbers don't explode - cache factorial calculations so that each value needs to be computed just once for any given instance of the filter I've tested it against R and it has held up so far... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1341 348d0f76-0448-11de-a6fe-93d51630548a		2009-07-30 18:52:13 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src/org/broadinstitute/sting	Complete reworking of Fisher's exact test for strand bias:	2009-07-30 18:52:13 +00:00
test/org/broadinstitute/sting	Adding the intial changes for the new Genotyping interface. The bullet points are:	2009-07-29 19:43:59 +00:00