gatk3的最后一个经典版本3.8

Kristian Cibulskis b26b7bd8e5 fixed problem with isIntermediate flag being interited from FQ2BAM ... added support for tumor flag in metadata		2012-10-16 12:20:41 -04:00
licensing	Revert unintentional license change	2012-08-09 17:10:47 -04:00
protected/java	Making nContigs parameter hidden in ReduceReads	2012-10-15 13:49:08 -04:00
public	Updated google reflections due to stale slf4j version conflicting with other projects also trying to use Queue as a component.	2012-10-16 02:22:30 -04:00
settings	Updated google reflections due to stale slf4j version conflicting with other projects also trying to use Queue as a component.	2012-10-16 02:22:30 -04:00
.gitignore	adding some directories to gitignore	2012-10-10 13:26:13 -04:00
build.xml	Updated google reflections due to stale slf4j version conflicting with other projects also trying to use Queue as a component.	2012-10-16 02:22:30 -04:00
intellij_example.tar.bz2	Adding intellij example files to the repo	2012-10-15 13:49:09 -04:00
ivy.xml	Updated google reflections due to stale slf4j version conflicting with other projects also trying to use Queue as a component.	2012-10-16 02:22:30 -04:00